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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12856914, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLLGGLLA FGMAFAVVDA CPKYCVCQNL SESLGTLCPS KRLLFVPPDI DRRTVELRLG  60
   61 GNFIIHIGRQ DFANMTGLVD LTLSRNTISH IQPFSFLDLE SLRSLHLDSN RLPSLGEDTL 120
  121 RGLVNLQHLI VNNNQLGGIA DDAFEDFLLT LEDLDLSYNN LHGLPWDSVR RMVNLHQLSL 180
  181 DHNLLDHIAE GTFADLQKLA RLDLTSNRLQ KLPPDPIFAR SQASLLTATP FAPPLSFSFG 240
  241 GNPLHCNCEL LWLRRLERDD DLETCGSPGS LKGRYFWHIR EEEFVCEPPL ITQHTHKLLV 300
  301 LEGQAATLKC KAIGDPSPLI HWVAPDDRLV GNSSRTAVYD NGTLDILITT SQDSGPFTCI 360
  361 AANAAGEATA TVEVSIVQLP HLSNSTSRMA PPKSRLSDIT GSSKTSRGGG GSGAGEPPKS 420
  421 TPERAVLVSD VTTTSALVKW SVSKSAPRVK MYQLQYNCSD DEVLIYRMIP ASNKAFVVNN 480
  481 LVSGTGYDLC VLAMWDDTAT TLTATNIVGC AQFFTKADYP QCQSMHSQIK GGTMILVIGG 540
  541 IIVATLLVFI VILMVRYKVC NHDTPGKMAA ATVSNVYSQT NGSQPPPLGG IPVGQLPQAP 600
  601 PKVVVRNELM DFSTSLARAC DSSSSSSLGS GEAAGLGRGP WRLPPPAPRP KPSLDRLMGA 660
  661 FASLDLKSQR KEELLDSRTP AGRGAGTSSR GHHSDREPLL GPPATRARSL LPLPLEGKAK 720
  721 RSHSFDMGDF AAAAAAVPGG YSPPRRVSNI WTKRSLSVNG MLLPFEESDL VGARGTFGSS 780
  781 EWVMESTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle