YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	THG1_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAFRTARIG SLLAATSVIL RRCLRLGVAM AKSKFEYVRN FEVQDTCLPH CWVVVRLDGR  60
   61 NFHRFAEEHN FAKPNDSRAL HLMTKCAQTV MEELEDIVIA YGQSDEYSFV FRKKSNWFKR 120
  121 RASKFMTLVA SQFASSYVFY WRDYFEDQPL RYPPGFDGRV VLYPSNQTLK DYLSWRQADC 180
  181 HINNLYNTVF WALIQQSGLT PVQAQQRLKG TLTADKNEIL FSEFHINYNN EPHMYRKGTV 240
  241 LVWQKVEEVR TQEVRLPAEM EGEKKAVART RTRVVALNCD LIGDAFWKEH PEILAEEN

Type	Start	End	Confidence
Signal Peptide	1	25	0.89
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	298	0.97