YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12843464
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSALFASA SKAICSPFYR YGMSRRSSIG DKRQNPPWSR RRPVVVEAIS DEDWHLFCGD  60
   61 MVEILEGKDA GKQGKVVQVV RQRNWVVLEG LNTHYRYIGR TKDHRGTMIA SEAPLLHHQV 120
  121 KLVDPVDRKP TEIQWRFTEA GERVRVSTRS GRIIPKPEFP RADGIVPETW TDGPKDTSVE 180
  181 DALERTYVPR LKTLEEDVME AMGIQETRRF KKVYWY

Type	Start	End	Confidence
Signal Peptide	1	15	0.75
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	216	0.99