YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TLR6_MOUSE
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQDRKPIVG SFHFVCALAL IVGSMTPFSN ELESMVDYSN RNLTHVPKDL PPRTKALSLS  60
   61 QNSISELRMP DISFLSELRV LRLSHNRIRS LDFHVFLFNQ DLEYLDVSHN RLQNISCCPM 120
  121 ASLRHLDLSF NDFDVLPVCK EFGNLTKLTF LGLSAAKFRQ LDLLPVAHLH LSCILLDLVS 180
  181 YHIKGGETES LQIPNTTVLH LVFHPNSLFS VQVNMSVNAL GHLQLSNIKL NDENCQRLMT 240
  241 FLSELTRGPT LLNVTLQHIE TTWKCSVKLF QFFWPRPVEY LNIYNLTITE RIDREEFTYS 300
  301 ETALKSLMIE HVKNQVFLFS KEALYSVFAE MNIKMLSISD TPFIHMVCPP SPSSFTFLNF 360
  361 TQNVFTDSVF QGCSTLKRLQ TLILQRNGLK NFFKVALMTK NMSSLETLDV SLNSLNSHAY 420
  421 DRTCAWAESI LVLNLSSNML TGSVFRCLPP KVKVLDLHNN RIMSIPKDVT HLQALQELNV 480
  481 ASNSLTDLPG CGAFSSLSVL VIDHNSVSHP SEDFFQSCQN IRSLTAGNNP FQCTCELRDF 540
  541 VKNIGWVARE VVEGWPDSYR CDYPESSKGT ALRDFHMSPL SCDTVLLTVT IGATMLVLAV 600
  601 TGAFLCLYFD LPWYVRMLCQ WTQTRHRARH IPLEELQRNL QFHAFVSYSE HDSAWVKNEL 660
  661 LPNLEKDDIR VCLHERNFVP GKSIVENIIN FIEKSYKAIF VLSPHFIQSE WCHYELYFAH 720
  721 HNLFHEGSDN LILILLEPIL QNNIPSRYHK LRALMAQRTY LEWPTEKGKR GLFWANLRAS 780
  781 FIMKLALVNE DDVKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle