YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MCUR1_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSGSVAAER PRRTPSRQRL PSSGCGVPAR PGVSTLPGGR SWLRPRGRAA RASPLLFLLL  60
   61 VPSPRLAATA TATAPRRTLA ERSRPGLVLP AAALGAGRNA LGRLRLGARR VAALASSRRE 120
  121 LSLSAKCHQL EHRKENLPLS VSRQLYFDTH ALVCLLEANG FTIQQAEIIV SALVKITETN 180
  181 MNIIYKDMVS KMQQEIALQQ VLSKIANVKK DMVILEKSEF SALRAENEKI KLELHQLKQQ 240
  241 VMDEVTKVRT DTKLNFNLEK SRVKELYSLN EKKMLELRTE IVSLHAQQDR ALTQTDRKIE 300
  301 TEVAGLKTML EAHKLDTIKY LAGSVFTCLT VALGFYRLWI

Type	Start	End	Confidence
Cytoplasmic	1	51	0.62
Transmembrane Helix	52	68	0.50
Non-Cytoplasmic	69	86	0.65
Transmembrane Helix	87	102	0.40
Cytoplasmic	103	316	0.56
Transmembrane Helix	317	336	0.68
Non-Cytoplasmic	337	340	0.59