YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12845619
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNRNCPLF GGAFSAILPT GAIDVSDLRP VPDNQEVFCH PVTDQSLIIE LLELQAHVQG  60
   61 ERGARYHFED VGRVQGARAV HVLSVQPLCL ENLSLRGCCQ DAWSLSGKQQ VAKENQQVAK 120
  121 DVTLHQALLR LPQYQTDLLL TFNQPPCHSR SLGPENLSCP PWSLSNFEQL VTSLTLHDPN 180
  181 LFGPQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.50
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	185	0.99