YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12845434
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAARAAALG VRWLQRTTRG VVPLEARRAF HMTKDMLPGS YPRTPEERAA AAKKYNMRVE  60
   61 DYEPYPDDGM GYGDYPMLPN RSQHERDPWY QWDHSELRMN WGEPVHWDLD MYIRNRVDTS 120
  121 PTPVSWDVMC KHLFGFVAFM VFMFWVGHVF PSYQPVGPKQ YPYNNLYLER GGDPTKEPEP 180
  181 VVHYDI

Type	Start	End	Confidence
Cytoplasmic	1	129	0.91
Transmembrane Helix	130	150	0.85
Non-Cytoplasmic	151	186	0.93