YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12850891
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLLKLGVL CSGQGARVXL LRSWVVRHAY VSAFLQDQPT QGRCGTQHIH LSPSHHSGSK  60
   61 AASLHWTSER VVSVLLLGLI PAGYLNPCSV VDYSLAAALT LHSHWGLGQV VTDYVHGDTL 120
  121 PKAPRAGLLA LSAPTFAGLC YFNYHDVGIC RAVAMLWKL

Type	Start	End	Confidence
Cytoplasmic	1	70	0.55
Transmembrane Helix	71	85	0.43
Non-Cytoplasmic	86	159	0.65