YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CKLF5_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSAWDRRER PPEEGAAAGL QGFGVDKTFL SSLKGILLET ELALTFIIFI CFTASISAYM  60
   61 AAALLEFLIT LAFLFLCATQ YYQRFDRLNW PCLDFLRCLS AIVIFLVVSF AAVTSREGAA 120
  121 IAAFVFGIIL VSVFAYDAFK IYRTELMPST TEGDQQ

Type	Start	End	Confidence
Cytoplasmic	1	36	0.90
Transmembrane Helix	37	56	0.85
Non-Cytoplasmic	57	61	0.52
Transmembrane Helix	62	82	0.87
Cytoplasmic	83	92	0.86
Transmembrane Helix	93	113	0.94
Non-Cytoplasmic	114	118	0.84
Transmembrane Helix	119	139	0.94
Cytoplasmic	140	156	0.95