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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120538629, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEYKDSLHE FEGDSDFFPP PPRHRVGRER IHIQKSSVCS RAYFVVVMAF FHLYIINIIA  60
   61 LLLYVHYNTG SGEQDVPLEK SAGSPRAVPA EHQTPSSTAH LSPEMSFQLP RLEGIRVGHV 120
  121 QRVSIVPDRT HNMRTLSLKP LLFEIPGFLS VEESNVVMQL AQLKGLTHSS LLTNPDQEEQ 180
  181 LTQDELFSLL DLNQDGLLQR EEILSLSHST DGSWLSSYNL RKIHTGLETN PSGVLSLQEF 240
  241 KRVSGGVLRY SGAAQGLDGH TKVRQRSTHT RLYLGEGTHH LLKSVRNRVT RLTRLPSSLV 300
  301 DLSEAMEVVR YEQGVFSHAH HDSSPTHPDN SCTHTHLAAN TSNQVACRYL TVLLYLNSAD 360
  361 SGGETSFPVA DNRTYEEEVL GDLSQQYCDK GNLKVKPVAG TALLWYNHLS DGNGWVGELD 420
  421 EFSLHGDCLV TRGFKWTGSV WVNIDPDQQR QERYQRLVSW HPEGHSKTPE HGDFHQDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle