YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120537720, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIGFLVVA VCGLLVAWAD QLKQARTPLL PHRPFVVVWN APTESCRLRF KVDLDLSVFD  60
   61 IVANHNETLS GPNVTIFYHS HLGYYPYYTS SETPINGGLP QNQSLSKHLS KARADIDKLI 120
  121 PIKDFHGLGV IDWENWRPQW VRNWGSKDIY RNKSKELIRK LHPGWPQSKV ENEAKEVFER 180
  181 AGQVFMNSTL LLAESRRPHG LWGFYLFPDC YNYGYKQHPF RYTGECPNIE HVRNDHLMWL 240
  241 WKESTALYPS IYLDCELKSS TNTVKFVHYR VKEAMRIASI ARNDYTLPVF VYSRPFYAYT 300
  301 FVVLSESDLV HTIGESAALG AAGVVLWGSS EYARSQRNCL TVKKYIDGPL GHYVINVTSA 360
  361 AKLCSKALCK KNGKCVRKSL DSGAYLHLNP RFFNIRLNQG IRGPCFYVSG HLNNLDILDM 420
  421 KQKFTCQCYQ GWTGIYCEMP QMAEPLPPHP RDSILGELLF VLSLHFSCLS VIMFLGLCLL 480
  481 IKCLIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle