YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120537540
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTTCTRFT DEYQLYEELG KGAFSVVRRC VKLSTGQEYA AKIINTKKLS ARDHQKLERE  60
   61 ARICRLLKHP NIVRLHDSIS EEGFHYLLFD LVTGGELFED IVAREYYSEA DASHCIQQIL 120
  121 EAVLHCHQMG VVHRDLKPEN LLLASKCKNA AVKLADFGLA IEVQGDQQAW FGFAGTPGYL 180
  181 SPEVLRKEAY GKPVDIWACG VILYILLVGY PPFWDEDQHK LYQQIKAGAY DFPSPEWDTV 240
  241 TPEAKNLINQ MLTINPAKRI TAQEALKHPW VCQRSTVASM MHRQETVECL KKFNARRKLK 300
  301 GAILTTMLVS RNFSVGSRQT TAPASVTAAA AAVAAAAGTT AGLVEQAKTL LNKKKKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	321	0.75
Transmembrane Helix	322	344	0.72
Cytoplasmic	345	357	0.73