YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|121583842, gi...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTWTPNPRA KPFIPRQQRS LYLTWKYRLT NKRAVRRICQ ASAVLFLLIT VIVNIKLILD  60
   61 TRRVASEDDA AQEYDDALPN METPRRPASG RKVLDIEVYS SRSKVYVAVD GTTVLEDEIR 120
  121 EQGRGIHVIV LNQATGHVMA KRVFDTYSPH EDEAMILFLN MVTRGRILIF TIKDEGTFHL 180
  181 KDAAKNLLKG LGSQVAVTLG WRDMWTLVVK KGGQVYGEKH SKSPALSTWG DPVLLKTEVQ 240
  241 LTASEEAECH WADTELNRRR KLFCSKVEGY GSICSCKDPA PIEFNPDPLS NNNVYNIPVA 300
  301 VIAGNRPNYL YRMLRSLLSS HGVNPQMITV FIDGYYEEPM DVVDLFGLKG VQHTPISIKN 360
  361 ARVSQHYKAS LTATFNLHPD ADFAIVLEED LDISIDFFSF LGQTIHLLHE DDSLYCISAW 420
  421 NDQGYEHTAE DPSLLYRVES MPGLGWVLKK SLYKDELEPK WPTPEKLWDW DMWMRMPEQR 480
  481 KGRECVIPDV SRSYHFGIIG LNMNGYFHEV YFKKHKFNTI PNVQMKNVEN LKKDPYEIEI 540
  541 QNLLREAEVL DHSKNPCEDS FIPDTEGKTF VMFIKMEQET DTNTWTELAK CLHVWDLDVR 600
  601 GYHKGLWRLF RKKNHILVVA FPISPYSVKK PSNVTPIHLE PAPKEEGPPV EQM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle