YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120537819
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGCARMMSSR LLLLVLAALA ACLRSGRAQG DPLPPSLVDL VMNSPISTVD DLKKLLDVES  60
   61 VEEDDEKPET EMHSNGTHKR LPRSLSIQVA QQAMCKVRTE VMEVTRAMFD RRNANFMLWP 120
  121 SCVEVQRCSG CCNARTLQCV PVITETRHLQ ITKIQYINRQ PSYEKVVIPV EDHVTCSCQL 180
  181 RVPAQPPRVQ TTPLPPPRLH PKVTPPKTQS KEELHRNDEL KHNQQLHLED KESQELQWQS 240
  241 KYTVAHTDRQ TPHQQTLTHT PAYASRGDFP TRQTTLGNPH MMSDATQTEE ADHIKSEHSG 300
  301 DDMAKKTTDK HSQEEQPFNR TTPQQPKSPS QTSVQSERGI SSQSDTLTRT YSHVEVVGQS 360
  361 SGLSEVLTHQ SDQSEVRKRH HHSHQSEKQE EMHHLRHQHH RHHQRHQFTT QAVSKQQTST 420
  421 QRTVMKAPPT TPSAPQTPPP LPSPRKRRRK HRKRISKASM RAMIMVMS

Type	Start	End	Confidence
Signal Peptide	1	28	0.95
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	468	0.99