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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189181696, gi...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVMKLPQM IRKVFTPFIN MAKPLKPPLF KSITAGESSY SSQNSSSPEV IEKVGKAVAE  60
   61 GDLQKVIYTV KEEMQSKSRY TVKIAVTGDS GNGMSSFVNA LRLIGHEEED SAPTGVVRTT 120
  121 QKPACYSSFH FPYVELWDLP GTGVTAQSME SYLDEMQFSA YDLIIIIASE QFSSNHVKLA 180
  181 EAMQRMRKRF YVVWTKLDRD ISTSTFPEPQ LLQSIQKNIR ENLQKAQVRD PPIFLVSCFS 240
  241 PSFHDFLDLR ETLRKDIHNI RYRDPLETLS QVCDKCINNK ALSLKEDLMF TKHLEAAVSP 300
  301 PYDIADLERS LDTYQKLFGV DNESLRRVAQ STGRPEMSTR ALQFQDLIKM DRRLRLMMCF 360
  361 VVNILLRVLG SPWWFGLWDV VTRYFRHQRQ KRIIEIVAKN TKTSLRRALE DYTLPPEILC 420
  421 EGSGVPSSGI QAASGSFCIE P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle