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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ESRP1_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVNPDYLVL LFTTTSGASG DKLGSDEKEI VQLVWQVVDL ATKKAGQVNE LLVKPDHIEL  60
   61 SEECQELSGL TDEALTPVDP LEVAIDQLNQ RLCAEVDTGA GNTFYLCTDG QLHVRQVLHP 120
  121 EASSKNILLP DCFFSFFDLR KEFKKEFPSE VKLKDLNLQV MADHLNVAVD SSLHAFTAYK 180
  181 VQQMVDIVLA LISEPTCHEF TFPEKVNEKF ETGTCSKMER VDDNTVIRAR GLPWQSSDQD 240
  241 IARFFRGLNI AKGGAALCLN AQGRRNGEAL VRFESEEHRD LALQRHKHHM GGRYIEVYKA 300
  301 TGEDFLKIAG GTSNEVASFL SRENQIIVRM RGLPFNATAE QVLQFFSPAC PVTDGSEGIL 360
  361 FVRFPDGRPT GDAFVLFSCE EHAQNALKKH KDMLGKRYIE LFKSTAAEVQ QVLNKYSSAP 420
  421 LIPVAPSPIL SVVAPPTFVP QTAAVPGVRD CVRLRGLPYD ASIQDILVFL GEYGADIKTH 480
  481 GVHMVLNHQG RPSGEAFIQM RSAERAFLAA QRCHKRSMKE RYVEVFACSA QEVNIVLMGG 540
  541 TLNRSGLSPP PCLSPPSYTF PHGAPVLPAG AVLPAGAVLP VESAGIYPSQ FLLGPRPPPH 600
  601 TTTFYPASNT LYMNYTTYYP SPPGSPSNIS YFPTGHTPSA GSVLSAQPTA LIRMQGHAHS 660
  661 HAYNNGVKEI LSMVQGYQPG NSDAFVTFPS MLSAKQPIGD QTVGGGAYLD LQLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle