YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12852787, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHAARPGRF FGVYLLYCQN PRHRGRVYVG FTVNPARRVR QHNAGRKKGG AWRTSGRGPW  60
   61 DMVLIIHGFP SAVAALRFEW AWQHPQASRR LTHVGPRLRS EAAFAFHLRV LAHMLRVPPW 120
  121 VRLPLTLRWL RPDFRHELCP APPAHMPIAF GPPPPQPLVP KRPAVSEADS ERQLDLGTKA 180
  181 RCSLCARLLQ VRAHRGGDLG LCPP

Type	Start	End	Confidence
Cytoplasmic	1	59	0.53
Transmembrane Helix	60	81	0.57
Non-Cytoplasmic	82	204	0.77