YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12853650
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRSAADLV LSLPDLSFPS FQTGVMLSCF WFFSKHISSA LMSLPRVLHR FTAPQCLASR  60
   61 YPLGPLLASP RRLLASVASS QDSTRPSRVR QNFHPDSEAA INRQINLELY ASYVYLSMAY 120
  121 YFSRDDVALY NFSKYFLRQS LEEREHAEKL MKLQNQRGGR ICLQDIKKPD KDDWECGLRA 180
  181 MECALLLERN VTQSLLDLHT LASEKGDPHL CDFLETHYLH EQVKSIKELG DHVHNLVTMG 240
  241 APAAGLAEYL FDKHTLGSES KH

Type	Start	End	Confidence
Cytoplasmic	1	15	0.33
Transmembrane Helix	16	34	0.49
Non-Cytoplasmic	35	262	0.84