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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MSRE_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKEMTENQR LCPHEREDAD CSSESVKFDA RSMTASLPHS TKNGPSVQEK LKSFKAALIA  60
   61 LYLLVFAVLI PVVGIVTAQL LNWEMKNCLV CSRNTSDTSQ GPMEKENTSN VEMRFTIIMA 120
  121 HMKDMEERIQ SISNSKADLI DTGRFQNFSM ATDQRLNDIL LQLNSLILSV QEHGNSLDAI 180
  181 SKSLQSLNMT LLDVQLHTET LHVRVRESTA KQQEDISKLE ERVYKVSAEV QSVKEEQAHV 240
  241 EQEVKQEVRV LNNITNDLRL KDWEHSQTLK NITFIQGPPG PQGEKGDRGL TGQTGPPGAP 300
  301 GIRGIPGVKG DRGQIGFPGG RGNPGAPGKP GRSGSPGPKG QKGEKGSVGG STPLKTVRLV 360
  361 GGSGAHEGRV EIFHQGQWGT ICDDRWDIRA GQVVCRSLGY QEVLAVHKRA HFGQGTGPIW 420
  421 LNEVMCFGRE SSIENCKINQ WGVLSCSHSE DAGVTCTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle