YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GAPT_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLECFESSPV AVAVGVSLLV LLLLCGIGCA WHWNRRESTP FTLPKFMQRR SSRQKDVTKT  60
   61 VSSSAYVISP SMKASVESKG HKSTAKRNKM HGNYENVEVC PPCTEGTTEK ALYENTQPSN 120
  121 LEEHVYGNQT DPLYYNFQKP SPPPPQDDDI YILPDCD

Type	Start	End	Confidence
Cytoplasmic	1	9	0.35
Transmembrane Helix	10	31	0.58
Non-Cytoplasmic	32	157	0.75