YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12855273
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSARPAASL SLGFRRCHLP TGKCERGAEG RRRRRRRHHG EKVEQSQREE AETIGGESGH  60
   61 GCCVCQSGCC QQLGDPLEAF PVFKKYDRNG LNVSIECKRV SGLEPATVDW AFDLTKTNMQ 120
  121 TMYEQSEWGW KDREKREEMT DDRAWYLIAW ENSSIPVAFS HFRFDVECGD EVLYCYEVQL 180
  181 ESKVRRKGLG KFLIQILQLM ANSTQMKKVM LTVFKHNHGA YQFFREALQF EIDGSSPSMS 240
  241 GCCGEDCSYE ILSRRTKFGD SQHSHTGGHC GGCCH

Type	Start	End	Confidence
Signal Peptide	1	17	0.59
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	275	0.99