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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DSG3_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCLFPRALG SLALLMVVLL VQGELHVKPG GQHREDGTAL QLAKRRYKRE WVKFAKPCRE  60
   61 REDNSRRNPI AKITSDFQKN QKITYRISGV GIDQPPFGIF VVDPNNGDIN ITAIVDREET 120
  121 PSFLITCRAL NALGQDVERP LILTVKILDV NDNPPIFSQT IFKGEIEENS ASNSLVMILN 180
  181 ATDADEPNHM NSKIAFKIVS QEPAGMSMFL ISRNTGEVRT LTSSLDREQI SSYHLVVSGA 240
  241 DNDGTGLSTQ CECSIKIKDV NDNFPVLRES QYSARIEENT LNAELLRFQV TDWDEEYTDN 300
  301 WLAVYFFTSG NEGNWFEIET DPRTNEGILK VVKALDYEQV QSMQFSIAVR NKAEFHQSVI 360
  361 SQYRVQSTPV TIQVIDVREG ISFRPPSKTF TVQRGVSTNK LVGYILGTYQ ATDEDTGKAA 420
  421 SSVRYVLGRN DGGLLVIDSK TAQIKFVKNI DRDSTFIVNK TISAEVLAID ENTGKTSTGT 480
  481 IYVEVPSFNE NCPSVVLEKK DICTSSPSVT LSVRTLDRGK YTGPYTVSLE EQPLKLPVMW 540
  541 TITTLNATSA LLQAQQQVSP GVYNVPVIVK DNQDGLCDTP ESLTLTVCQC DDRSMCRAPI 600
  601 PSREPNTYGE SSWRLGPAAI GLILLGLLML LLAPLLLLTC DCGSGPIGGA ATGGFIPVPD 660
  661 GSEGTIHQWG IEGAQPEDKE ITNICVPPVT TNGADFMESS EVCTNTYAGG TMVEGASGME 720
  721 MITKLGGATG ATAALGPCSL GYSGTMRTRH STGGTLKDYA APVNMTFLGS YFSQKSLAYA 780
  781 EEEDEREVND CLLIYDDEGE DAAPHSPTLS SCSIFGDDLD DNFLDSLGPK FKKLAEICLG 840
  841 IDDEAKQAKP GPKDSGSGAD TCARSMEVPQ SGSNRYQTLP GSLEVTQTGS KICHTLSGNQ 900
  901 ETSVMSTSGS VHPAVAIPDP LQLGNYLLTE TYSTSGSFAQ PTTVTFDPHV TQNVTVTERV 960
  961 ICPLPSASSS IVAPTELRGS YNMLYTKETC SHL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle