YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX3_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSMWNFLK RHKKKCIFLG TVLGGVYILG KYGQKKIREI QEREAAEYIA QARRQYHFES  60
   61 NQRTCNMTVL SMLPTLREAL MQQLNSESLT ALLKSRPSNK LEIWEDLKII SFTRSIVAVY 120
  121 STCMLVVLLR VQLNIIGGYI YLDNATVGKN GTTVLAPPDV QQQYLSSIQH LLGDGLTELV 180
  181 TVIKQAVQRI LGSVSLKHSL SLLDLEQKLK EIRILVEQHQ SSWNDKDVSR SSLCQYMMPD 240
  241 EETPLAAQAY GLSHRDITTI KLLNETRDML ESPDFSTVLN TCLNRGFSRL LDNMAEFFRP 300
  301 TEQDLQHGNS INSLSSVSLP LAKIIPIVNG QIHSVCSETP SHFVQDLLMM EQVKDFAANV 360
  361 YEAFSTPQQL EK

Type	Start	End	Confidence
Signal Peptide	1	30	0.67
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	372	0.99