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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: S122_MOUSE, S12A...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGPAGPRL APAARPGWGR AAGCRRRGGP ARHGRASGQE DATTAGRQAG GGVRGEGTPA  60
   61 AGDGLGRPLG PTPSQSRFQV DPVSENAGRA AAAAAAAAAA AAAAGAAGKE TPAAGKAGGE 120
  121 SGVAKGSEEA KGRFRVNFVD PAASSSADDS LSDAAGVGGD GPNVSFQNGG DTVLSEGSSL 180
  181 HSGGGSGHHQ QYYYDTHTNT YYLRTFGHNT MDAVPRIDHY RHTAAQLGEK LLRPSLAELH 240
  241 DELEKEPFED GFANGEESTP TRDAVVAYTA ESKGVVKFGW IKGVLVRCML NIWGVMLFIR 300
  301 LSWIVGQAGI GLSVVVIAMA TVVTTITGLS TSAIATNGFV RGGGAYYLIS RSLGPEFGGA 360
  361 IGLIFAFANA VAVAMYVVGF AETVVELLKE HSILMIDEIN DIRIIGAITV VILLGISVAG 420
  421 MEWEAKAQIV LLVILLLAIA DFVIGTFISL ESKKPKGFFG YKSEIFNENF GPDFREEETF 480
  481 FSVFAIFFPA ATGILAGANI SGDLADPQSA IPKGTLLAIL ITTVVYIGIA VSVGSCVVRD 540
  541 ATGNVNDTIT TELTNCTSAA CKLNFDFSYC ESNTCSYGLM NNFQVMSMVS GFAPLISAGI 600
  601 FSATLSSALA SLVSAPKIFQ ALCKDNIYPA FQMFAKGYGK NNEPLRGYIL TFLIALGFIL 660
  661 IAELNVIAPI ISNFFLASYA LINFSVFHAS LAKSPGWRPA FKYYNMWISL IGAILCCIVM 720
  721 FVINWWAALL TYVIVLGLYI YVTYKKPDVN WGSSTQALTY LSALQHSIRL SGVEDHVKNF 780
  781 RPQCLVMTGS PNSRPALLHL VHDFTKNVGL MICGHVHMGP RRQAMKEMSI DQARYQRWLI 840
  841 KNKMKAFYAP VHADDLREGA QYLMQAAGLG RMKPNTLVLG FKKDWLQADM RDVDMYINLF 900
  901 HDAFDIQFGV VVIRLKEGLD ISHLQGQEEL LSSQEKSPGT KDVVVNVDYS KKSDQDTCKS 960
  961 SGEKSITQKD EEEDGKTPTQ PLLKKESKGP IVPLNVADQK LLEASTQFQK KQGKNTIDVW1020
 1021 WLFDDGGLTL LIPYLLTTKK KWKDCKIRVF IGGKINRIDH DRRAMATLLS KFRIDFSDIM1080
 1081 VLGDINTKPK KENIIAYDDM IEPYRLHEDD KEQDIADKMK EDEPWRITDN ELELYKTKTY1140
 1141 RQIRLNELLK EHSSTANIIV MSLPVARKGA VSSALYMAWL EALSKDLPPV LLVRGNHQSV1200
 1201 LTFYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle