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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMPE_MOUSE
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFAEEEPSK KYCIKGKHVA IICGVVVAVG LIVGLSVGLT RSCEQDTTPA PSQPPPEAST  60
   61 ALPPQDQNVC PDSEDESGEW KNFRLPDFIN PVHYDLEVKA LMEEDRYTGI VTISVNLSKP 120
  121 TRDLWLHIRE TKITKLPELR RPSGEQVPIR RCFEYKKQEY VVIQAAEDLA ATSGDSVYRL 180
  181 TMEFKGWLNG SLVGFYKTTY MEDGQIRSIA ATDHEPTDAR KSFPCFDEPN KKSTYSISII 240
  241 HPKEYSALSN MPEEKSEMVD DNWKKTTFVK SVPMSTYLVC FAVHRFTAIE RKSRSGKPLK 300
  301 VYVQPNQKET AEYAANITQA VFDYFEDYFA MEYALPKLDK IAIPDFGTGA MENWGLVTYR 360
  361 ETNLLYDPLL SASSNQQRVA SVVAHELVHQ WFGNTVTMDW WDDLWLNEGF ASFFEFLGVN 420
  421 HAEKDWQMLS QVLLEDVFPV QEDDSLMSSH PVVVTVSTPA EITSVFDGIS YSKGASILRM 480
  481 LQDWITPEKF QKGCQIYLKK FQFANAKTSD FWDSLQEASN LPVKEVMDTW TSQMGYPVVT 540
  541 VSGRQNITQK RFLLDSKADP SQPPSELGYT WNIPVRWADN DNSRITVYNR LDKGGITLNA 600
  601 NLSGDAFLKI NPDHIGFYRV NYEGGTWDWI AEALSSNHTR FSAADRSSFI DDAFALARAQ 660
  661 LLNYKIALNL TMYLKSEEDF LPWERVISSV SYIISMFEDD RELYPMIETY FQGQVKPVAD 720
  721 LLGWQDTGSH ITKLLRASIL GFACKMGDRE ALGNASQLFD SWLKGSASIP VNLRLLVYRY 780
  781 GMQNSGNEAA WNYTLEQYQK TSLAQEKEKL LYGLASVKDV KLLARYLEML KDPNIIKTQD 840
  841 VFTVIRYISY NSYGKTMAWN WIQLNWDYLV SRFTINDRYL GRIVTIAEPF NTELQLWQMQ 900
  901 SFFAKYPNAG AGAKPREQVL ETVKNNIEWL NVNRQSIREW FASLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle