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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ZAN_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPVWTLML LVGAAWGQEQ VPAWRPNSPD LGPMVHTSRE DSILSKCDFE DNSRPFCDWS  60
   61 QMSADDGDWI RTTGPSLTGT SGPPGGYPNG EGYYLHMDPK TFPQGGVARL RSPDIWEQGP 120
  121 LCVHFAFHMF GLSWGAQLRL LLLRGRKHLR PYVLWKHVNT QSPSWMPTTV TVPADHDIPS 180
  181 WLMFEGMRGN TAYLDISLDG LSIQRGTCNQ VCMSQMCTFD TLNDLCGWSW VPTATGAKWT 240
  241 QKKGPTGKQG VGPAEDFSNP GNGYYMLLDS TNARPGQKAV LLSPLSHSRG CMTLSFHYIM 300
  301 HGQGHEEGLF VYATFLGNIR KYTLFSGHPG PDWQAVSVNY TGQGQIQFMV VGMFGNIPEP 360
  361 AIAVDAISIA PCGESFPQCD FEDRVHPFCD WNQVYGDMGH WSWGSKSVPT LIAGSPREFP 420
  421 YGGEHYIFFD SVKLSQEGQS ARLVSPPFCA PGGICVEFAY HMYGLGKGTT LKLLLGSPAG 480
  481 SSPIPLWNRV GSQSSGWMNS SVTIPKGYQQ PMQLFIEATR GTSTAFVVAL NFILISHGPC 540
  541 RVLLQTEIPS SPLLPPTGPS ESTVPTLPME QPTSPTKATT VTIEIPTTPT EEATIPTETT 600
  601 TVPTEVINVS PKETSIPPEV TIPTEVITVS PEEIISPTEV TPVPTDVTAA YVEATNASPE 660
  661 ETSVPPEVTI LTEVTTVSPE ETTVPTEVPI VLIEATAFPT GETTLYTEVP TVPTEVTGVH 720
  721 TEVTNVSPEE TSVPTEETIS TEVTTVSPEE TTVPTEVPIV LIEATASPTG EITLYTEVPT 780
  781 VPTEVTGVHT EVTNVSPEET SVPTEETIST EVTTVSPEET TLPTEVPTVS TEVTNVSPEE 840
  841 TSVPPEETIL TTLYTEVPTV PTEVTGVHTE VTNVSPEETS VPTEETISTE VTTVSPEETT 900
  901 LPTEVPTVST EVTNVSPEET SVPPEETILT EITTVSPEET VFPIEGTTLP TEVLTVPIEV 960
  961 TTFPTGETTV PTEVPTVSTE MTGVHTEVTT VFPEETSIPT EVATVLPASI PPEETTTPTE1020
 1021 VTTTPPEETT IPAEVTTVPP ASIPPEETAS LTEVTTTPPE ETTTPTEVTT VPPEKTTIPT1080
 1081 EVTTVPPASI FPEETTVPPE ETTIASEETT VSTQETTLLT EQSAVTQTSI ACRPPCPSPP1140
 1141 LMPIGPLLSK PPGVSMFSLA PTTGVSTTES CPPNAHIELC ACPASCESPK PSCQPPCIPG1200
 1201 CVCNPGFLFS NNQCINESSC NCPYNNKHYK PGEEWFTPNC TERCRCLPGS LMECQISQCG1260
 1261 THTVCQLKSD QYQCEPYGKA TCLVYGDLHF VTFDERHIGF TGTCTYILTQ TCSNSTDHFF1320
 1321 RITANTEERG VEGVSCLDKV VISLPETTVT MISGRHTLIG DQEVTLPAIL SDDTYVGLSG1380
 1381 RFVELRTTFG LRVRWDGDQQ LFVTVSSTFS GKLCGFCGNY DGDSSNDNLK SDGMMTHDEE1440
 1441 ELRLSWQVEE DEDKDWVSSR CQKKKNPPSC DAALGSTMSG PKLCGQLVNP SGPFEACLLH1500
 1501 LKASSFLDNC VTDMCSFQGL QQKLCARMSA MTATCQDAGY PVKPWREPQF CPLVCPKNSR1560
 1561 YSLCAKPCPE TCHPISTTQH CSDKCVEGCE CDPGFILSGS ECVPSSQCGC TSFQGRYFKL1620
 1621 QEQWFNPDCK EICTCESHNH ILCKPWKCKA QEACSYKNGV LGCHAQGAAT CMVSGDPHYL1680
 1681 TFDGALHHFM GTCTYVLTQP CWSKSQENNF VVSATNEIHD GNLEVSYVKA VHVQVFDLKI1740
 1741 SMFKGQKVVL NNQRVVLPVW PSQGRVTIRL SGIFVLLYTN FGLQVRYDGR HLVEVTVPSS1800
 1801 YTGSLCGLCG NYNNNSMDDN LRADMKPAGN SLLLGAAWKI LEASDPGCFL AGGKPSRCAD1860
 1861 SDMDDVWTKK CAILMNPLGP FSNCHEAVPP QASFSSCVYG QCETNGDNLT FCHSLQAYAS1920
 1921 LCAQAGQVTT WRNSTFCPMR CPPRSSYNPC ANSCPATCLT LSTPRDCPTL PCVEGCECQS1980
 1981 GHILSGTTCV PLRQCGCSDQ DGSYHLLGES WYTEKTCTTL CTCSAHSNIT CSPTACKANH2040
 2041 VCLRQEGLLR CAAEMGECRI SEDSQIVSFD DHSHPIQDTC TYILVKVCHP NTNMPFFMIS2100
 2101 AKTDINTNGK NKTFGVYQLY IDIFNFHITL QKDHLVLISL INDSIVTLPT TTHIPGVSVM2160
 2161 TEDVYTIVTI KDEIQVKFES NNFLDVKIPA SSNGKVCGVC GNFNGEEEDE LMTPSGELAE2220
 2221 DEQEFMNSWK DKSMDPNCQK IEGQNLQVEQ QEIMNGKCRP IDFEKAQANC QTALQGPAWA2280
 2281 HCSSRVPIKP FLLKCMNSFC EFRELFRALC DSLQSFEDAC QNQGLKPPIW RNSSFCPLEC2340
 2341 PAHSHYTNCL PSCPPSCLDP DSRCEGSGHK VPATCREGCI CQPDYVLLND KCVLRSHCGC2400
 2401 KDAQGVFIPA GKTWISEDCT QSCTCMKGSM RCWDFQCPPG TYCKNSNDGS SNCVKISLQC2460
 2461 PAHSKFTDCL PPCHPSCSDP DGHCEGISTN AHSNCKEGCV CQPGYVLRND KCVLRIECGC2520
 2521 QHTQGGFIPA GKNWTSRGCS QSCDCMEGVI RCQNFQCPSG TYCQDIEDGT SNCANITLQC2580
 2581 PAHSSFTNCL PPCQPSCSDP EGHCGGSTTK APSACQEGCV CEPDYVVLNN KCVPRIECGC2640
 2641 KDAQGVLIPA DKIWINKGCT QTCACVTGTI HCRDFQCPSG TYCKDIKDDA SNCTEIILQC2700
 2701 PDHSLYTHCL PSCLLSCSDP DGLCRGTSPE APSTCKEGCV CDPDYVLSND KCVLRIECGC2760
 2761 KDAQGVLIPA GKTWINRGCT QSCSCMGGAI QCQNFKCPSE AYCQDMEDGN SNCTSIPLQC2820
 2821 PAHSHYTNCL PTCQPSCSDP DGHCEGSSTK APSACKEGCV CEPDYVMLNN KCVPRIECGC2880
 2881 KDTQGVLIPA DKTWINRGCT QSCTCRGGAI QCQKYHCSSG TYCKDMEDDS SSCATITLQC2940
 2941 PAHSHFTNCL PPCQPSCLDS EGHCEGSTTK APSACQEGCV CEPDYVVLNN KCVPRIECGC3000
 3001 KDAQGVLIPA DKTWINRGCT QSCTCKGGAI QCQKFQCPSE TYCKDIEDGN SNCTRISLQC3060
 3061 PANSNFTSCL PSCQPSCSNT DVHCEGSSPN TLSSCREGCV CQSGYVLHND KCILRNQCGC3120
 3121 KDAQGALIPE GKTWITSGCT QSCNCTGGAI QCQNFQCPLK TYCKDLKDGS SNCTNIPLQC3180
 3181 PAHSRYTNCL PSCPPLCLDP EGLCEGTSPK VPSTCREGCI CQPGYLMHKN KCVLRIFCGC3240
 3241 KNTQGAFISA DKTWISRGCT QSCTCPAGAI HCRNFKCPSG TYCKNGDNGS SNCTEITLQC3300
 3301 PTNSQFTDCL PSCVPSCSNR CEVTSPSVPS SCREGCLCNH GFVFSEDKCV PRTQCGCKDA3360
 3361 RGAIIPAGKT WTSKGCTQSC ACVEGNIQCQ NFQCPPETYC KDNSEGSSTC TKITLQCPAH3420
 3421 TQYTSCLPSC LPSCLDPEGL CKDISPKVPS TCKEGCVCQS GYVLNSDKCV LRAECDCKDA3480
 3481 QGALIPAGKT WTSPGCTQSC ACMGGAVQCQ SSQCPPGTYC KDNEDGNSNC AKITLQCPAH3540
 3541 SLFTNCLPPC LPSCLDPDGL CKGASPKVPS TCKEGCICQS GYVLSNNKCL LRNRCGCKDA3600
 3601 HGALIPEDKT WVSRGCTQSC VCTGGSIQCL SSQCPPGAYC KDNEDGSSNC ARIPPQCPAN3660
 3661 SHYTDCFPPC PPSCSDPEGH CEASGPRVLS TCREGCLCNP GFVLDRDKCV PRVECGCKDA3720
 3721 QGALIPSGKT WTSPGCTQSC ACMGGVVQCQ SSQCPPGTYC KDNEDGNSNC AKITLQCPTH3780
 3781 SNYTDCLPFC LPSCLDPSAL CGGTSPKGPS TCKEGCVCQP GYVLDKDKCI LKIECGCRDT3840
 3841 QGAVIPAGKT WLSTGCIQSC ACVEGTIQCQ NFQCPPGTYC NHNNNCAKIP LQCPAHSHFT3900
 3901 SCLPSCPPSC ANLDGSCEQT SPKVPSTCKE GCLCQPGYFL NNGKCVLQTH CDCKDAEGGL3960
 3961 VPAGKTWTSK DCTQSCACTG GAVQCQNFQC PLGTYCKDSG DGSSNCTKIH KGAMGDGVLM4020
 4021 AGGIRALQCP AHSHFTSCLP SCPPSCSNLD GSCVESNFKA PSVCKKGCIC QPGYLLNNDK4080
 4081 CVLRIQCGCK DTQGGLIPAG RTWISSDCTK SCSCMGGIIQ CRDFQCPPGT YCKESNDSSR4140
 4141 TCAKIPLQCP AHSHYTNCLP ACSRSCTDLD GHCEGTSPKV PSPCKEGCLC QPGYVVHNHK4200
 4201 CVLQIHCGCK DAQGGFVPAG KTWISRGCTQ SCACVGGAVQ CHNFTCPTGT QCQNSSCSKI4260
 4261 TVQCPAHSQY TTCLPSCLPS CFDPEGLCGG ASPRAPSTCR EGCVCEADYV LREDKCVLRT4320
 4321 QCGCKDAQGD LIPANKTWLT RGCAQKCTCK GGNIHCWNFK CPLGTECKDS VDGGSNCTKI4380
 4381 ALQCPAHSHH TYCLPSCIPS CSNVNDRCES TSLQRPSTCI EGCLCHSGFV FSKDKCVPRT4440
 4441 QCGCKDSQGT LIPAGKNWIT TGCSQRCTCT GGLVQCHDFQ CPSGAECQDI EDGNSNCVEI4500
 4501 TVQCPAHSHY SKCLPPCQPS CSDPDGHCEG TSPEAPSTCE EGCVCEPDYV LSNDKCVPSS4560
 4561 ECGCKDAHGV LIPESKTWVS RGCTKNCTCK GGTVQCHDFS CPTGSRCLDN NEGNSNCVTY4620
 4621 ALKCPAHSLY TNCLPSCLPS CSDPEGLCGG TSPEVPSTCK EGCICQSGYV LHKNKCMLRI4680
 4681 HCDCKDFQGS LIKTGQTWIS SGCSKICTCK GGFFQCQSYK CPSGTQCEES EDGSSNCVSS4740
 4741 TMKCPANSLY THCLPTCLPS CSNPDGRCEG TSHKAPSTCR EGCVCQPGYL LNKDTCVHKN4800
 4801 QCGCKDIRGN IIPAGNTWIS SDCTQSCACT DGVIQCQNFV CPSGSHCQYN EDGSSDCAAN4860
 4861 KLERCTIFGD PYYLTFDGFT YHFLGRMNYY LIKTVDKLPR GIEPLIMEGR NKISPKGSST4920
 4921 LHEVTTIVYG YKIQLQEELV VLVNDEKVAV PYNPNEHLRV MLRAQRLLLV TDFEMVLDFD4980
 4981 GKHSAVISLP TTYRGLTRGL CGNYDRDQSN ELMLPSGVLT SNVHVFGNSW EVKAQHAFFR5040
 5041 FPRALPEDEE RDEEPDLLQS ECSQEQTALI SSTQACRVLV DPQGPFAACH QIIAPEPFEQ5100
 5101 RCMLDMCTGW KTKEEEELRC RVLSGYAIIC QEAGANMTGW RDHTHCAMTC PANTVYQRCM5160
 5161 TPCPASCAKF VTPKVCEGPC VEGCASLPGY IYSDTQSLPV THCGCTADGI YYKLGDSFVT5220
 5221 NDCSQHCTCA SQGILLCEPY GCRAGESCMV ANFTRGCFQD SPCLQNPCHN DGRCEEQGAT5280
 5281 FICHCDFGYG GEFCTEPQDI TTRKKIEASS LVAILPGVLV MVLVPVLLPR VYVYMATRTT5340
 5341 MGRRRMKRKE KKLLRQSRLR LEDADVPEPT FKATEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle