YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12833936
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPEASGSG EKVEGSEPSV TYYRLEEVAK RNSAEETWMV IHGRVYDITR FLSEHPGGEE  60
   61 VLLEQAGADA TESFEDVGHS PDAREMLKQY YIGDVHPSDL KPKGDDKDPS KNNSCQSSWA 120
  121 YWFVPIVGAI LIGFLYRHFW AGSKSS

Type	Start	End	Confidence
Non-Cytoplasmic	1	118	0.52
Transmembrane Helix	119	140	0.94
Cytoplasmic	141	146	0.49