YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CAR19_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDQTYCDRL VQDTPFLTGQ GRLSEQQVDR IILQLNRYYP QILTNKEAEK FRNPKASLRV  60
   61 RLCDLLSHLQ QRGERHCQEF YRALYIHAQP LHSHLPSRYS PQNSDCRELD WGIESRELSD 120
  121 RGPMSFLAGL GLAAGLALLL YCCPPDPKVL PGTRRVLAFS PVIIDRHVSR YLLAFLADDL 180
  181 GGL

Type	Start	End	Confidence
Cytoplasmic	1	122	0.54
Transmembrane Helix	123	143	0.75
Non-Cytoplasmic	144	183	0.72