YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12835374
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLDSVARIV KVQLPAYLKQ LPVPDSITGF ARLTVSDWLR LLPFLGVLAL LGYLAVRPFF  60
   61 AKKKQQKDSL INLKIQKENP KVVNEINIED LCLTKAAYCR CWRSKTFPAC DGSHNKHNEL 120
  121 TGDNVGPLIL KKKEV

Type	Start	End	Confidence
Non-Cytoplasmic	1	37	0.66
Transmembrane Helix	38	61	0.81
Cytoplasmic	62	135	0.65