YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21312084, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAAEPLRS VRHLSRVLLF LSQCYILSGD ENQLFSHLTE STEIPPYMTK CPSNGLCSRL  60
   61 PADCIECATN VSCTYGKPVT FDCTVKPSVT CVDQDLKPQR NFVINMTCRF CWQLPETDYE 120
  121 CSNSTTCMTV ACPRQRYFAN CTVRDHIHCL GNRTFPKLLY CNWTGGYKWS TALALSITLG 180
  181 GFGADRFYLG QWREGLGKLF SFGGLGIWTL IDVLLIGVGY VGPADGSLYI

Type	Start	End	Confidence
Cytoplasmic	1	164	0.64
Transmembrane Helix	165	189	0.57
Non-Cytoplasmic	190	198	0.35
Transmembrane Helix	199	224	0.81
Cytoplasmic	225	230	0.32