YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RDH11_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGFLLLLSL PFILYLVTPK IRKMLSSGVC TSNVQLPGKV AIVTGANTGI GKETAKDLAQ  60
   61 RGARVYLACR DVDKGELAAR EIQAVTGNSQ VFVRKLDLAD TKSIRAFAKD FLAEEKHLHL 120
  121 LINNAGVMMC PYSKTADGFE MHIGVNHLGH FLLTHLLLEK LKESAPSRIV NLSSLGHHLG 180
  181 RIHFHNLQGE KFYSAGLAYC HSKLANILFT KELAKRLKGS GVTTYSVHPG TVHSELTRYS 240
  241 SIMRWLWQLF FVFIKTPQEG AQTSLYCALT EGLESLSGSH FSDCQLAWVS YQGRNEIIAR 300
  301 RLWDVSCDLL GLPVDW

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	316	0.99