YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLP1_MOUSE, GLP1...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	144	0.99
Transmembrane Helix	145	169	0.91
Cytoplasmic	170	177	0.91
Transmembrane Helix	178	196	0.92
Non-Cytoplasmic	197	238	0.83
Transmembrane Helix	239	260	0.77
Cytoplasmic	261	267	0.79
Transmembrane Helix	268	287	0.95
Non-Cytoplasmic	288	307	0.91
Transmembrane Helix	308	330	0.92
Cytoplasmic	331	348	0.93
Transmembrane Helix	349	371	0.74
Non-Cytoplasmic	372	383	0.78
Transmembrane Helix	384	405	0.79
Cytoplasmic	406	489	0.79

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTPSLLRL ALLLLGAVGR AGPRPQGTTV SLSETVQKWR EYRRQCQHFL TEAPLLATGL  60
   61 FCNRTFDDYA CWPDGPPGSF VNVSCPWYLP WASSVLQGHV YRFCTAEGLW LHKDNSSLPW 120
  121 RDLSECEESK RGERNFPEEQ LLSLYIIYTV GYALSFSALV IASAILVGFR HLHCTRNYIH 180
  181 LNLFASFILR ALSVFIKDAA LKWMYSTAAQ QHQWDGLLSY QDSLGCRLVF LLMQYCVAAN 240
  241 YYWLLVEGVY LYTLLAFSVF SEQRIFKLYL SIGWGVPLLF VIPWGIVKYL YEDEGCWTRN 300
  301 SNMNYWLIIR LPILFAIGVN FLIFIRVICI VVSKLKANLM CKTDIKCRLA KSTLTLIPLL 360
  361 GTHEVIFAFV MDEHARGTLR FIKLFTELSF TSFQGLMVAI LYCFVNNEVQ MEFRKCWERW 420
  421 RLEHLNIQRD CSMKPLKCPT SSVSSGATVA AACMQPPARV PTAEPAVPVL PVGPSFWLGG 480
  481 HPRWERSWG