YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SYS1_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQFRSYVW DPLLILSQIV LMQTVYYGSL GLWLALVDAL VRSSPSLDQM FDAEILGFST  60
   61 PPGRLSMMSF VLNALTCALG LLYFIRRGKQ CLDFTVTVHF FHLLGCWLYS SRFPSALTWW 120
  121 LVQAVCIALM AVIGEYLCMR TELKEIPLSS APKSNV

Type	Start	End	Confidence
Cytoplasmic	1	13	0.81
Transmembrane Helix	14	37	0.78
Non-Cytoplasmic	38	64	0.91
Transmembrane Helix	65	85	0.94
Cytoplasmic	86	91	0.88
Transmembrane Helix	92	111	0.90
Non-Cytoplasmic	112	118	0.75
Transmembrane Helix	119	139	0.94
Cytoplasmic	140	156	0.97