YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HIG2A_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPGPVSPE APFDPSKPPV IEGFSPTVYS NPEGFKEKFI RKTRENPMVP IGCLGTAAAL  60
   61 TYGLYCFHRG QSHRSQLMMR TRIAAQGFTV VAILLGLAAS AMKSQA

Type	Start	End	Confidence
Cytoplasmic	1	47	0.81
Transmembrane Helix	48	67	0.78
Non-Cytoplasmic	68	82	0.57
Transmembrane Helix	83	102	0.93
Cytoplasmic	103	106	0.58