YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RX_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLPGCAPAM AHGSFSLAGH LLRSPGGSTS RLHSIEAILG FTKEDGILDT FPAERSSRSS  60
   61 KERDPRLGAQ PACPKAPAGG SESSPPAAPG FVPEYEATRP CYPKEQGEAR PSPGLSVGPA 120
  121 AGDSKLSEEE PPKKKHRRNR TTFTTYQLHE LERAFEKSHY PDVYSREELA GKVNLPEVRV 180
  181 QVWFQNRRAK WRRQEKLEVS SMKLQDSPLL SFIRSPPSSA LAPLGTGPGS GSGPPGSALP 240
  241 LEPWLGPTLP GGGATALQSL PGFGPPGQGL PASYTPPPPF LNSAPLGPGL QQLGPPPAYP 300
  301 CAPAFGDKFS LEERSPRNSS IAALRLKAKE HIQAIGKPWQ AL

Type	Start	End	Confidence
Signal Peptide	1	18	0.54
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	342	0.98