YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74220170, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRERFDRFLH EKNCMTDLLA KLEAKTGVNR SFIALGVIGL VALYLVFGYG ASLLCNLIGF  60
   61 GYPAYISMKA IESPNKDDDT QWLTYWVVYG VFSIAEFFSD LFLSWFPFYY MLKCGFLLWC 120
  121 MAPSPANGAE MLYRRIIRPI FLKHESQVDS VVKDVKDKAK ETADAISKEV KKATVNLLGD 180
  181 EKKST

Type	Start	End	Confidence
Cytoplasmic	1	30	0.77
Transmembrane Helix	31	60	0.76
Non-Cytoplasmic	61	87	0.63
Transmembrane Helix	88	122	0.63
Cytoplasmic	123	185	0.84