YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VA0E1_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYHGLTVPL IVMSVFWGFV GLLVPWFIPK GPNRGVIITM LVTCSVCCYL FWLIAILAQL  60
   61 NPLFGPQLKN ETIWYLKYHW P

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.73
Transmembrane Helix	7	28	0.94
Cytoplasmic	29	35	0.73
Transmembrane Helix	36	58	0.92
Non-Cytoplasmic	59	81	0.79