YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53733686
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAPKAGG SAPEAAGSAE APLQYSLLLQ YLVGDKRQPR LLEPGSLGGI PSPAKSEEQK  60
   61 MIERAMESCA FKAVLACVGG FVLGGAFGIF TAGIDTNVGF DPKDPYRTPT AKEVLKDMGQ 120
  121 RGMSYAKNFA IVGAMFSCTE CLVESYRGKS DWKNSVISGC ITGGAIGFRA GVKAGAIGCG 180
  181 GFAAFSAAID YYLR

Type	Start	End	Confidence
Cytoplasmic	1	68	0.99
Transmembrane Helix	69	92	0.91
Non-Cytoplasmic	93	169	0.71
Transmembrane Helix	170	193	0.76
Cytoplasmic	194	194	0.60