YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALG14_MOUSE
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.17
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSILILAAT AAGLVILLFQ RLWTVLGPHH VTPRESLRLL IVAGSGGHTT EILRLVGSLS  60
   61 NAYSPRHYVI AESDEMSAKK IHSLEELSRA QNDSTTEYPK YHLHRIPRSR EVRQSWLSSV 120
  121 FTTFYSMWFS FPLVLRIKPD LVLCNGPGTC VPICVSALLL GILGVKKVII VYVESICRVE 180
  181 TLSLSGKILR HLSDYFIVQW PTLKEKYPKS VYLGRIV

Type	Start	End	Confidence
Signal Peptide	1	24	0.48
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	147	0.50
Transmembrane Helix	148	165	0.57
Cytoplasmic	166	217	0.49