YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HEY2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRPCEETTS ESDLDETIDV GSENNYPGHA TSSVMRSNSP TTTSQIMARK KRRGIIEKRR  60
   61 RDRINNSLSE LRRLVPTAFE KQGSAKLEKA EILQMTVDHL KMLQATGGKG YFDAHALATD 120
  121 FMSIGFRECL TEVARYLSSV EGLDPSDPLR VRLVSHLSTC ASQREAAVMT SSMAHHHHPL 180
  181 HPHHWAAAFH HLPTALLQPN GLHTSESTPC RLSTSSEVPS AHGSALLTAT FAHADSALRM 240
  241 PSGGTVAPCV PPLSTSLLSL SATVHAAAAA ATAAAHSFPL SFAGAFPMLP SNAAAAAAVA 300
  301 AATAISPPLS VSAASSPQQT STGTNNKPYQ PWGTEVGAF

Type	Start	End	Confidence
Non-Cytoplasmic	1	256	0.53
Transmembrane Helix	257	286	0.63
Cytoplasmic	287	287	0.35
Transmembrane Helix	288	311	0.69
Non-Cytoplasmic	312	339	0.47