YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AT5G2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYACSKFVST RSLIRSTSLR STSQLLSRPL SAVELKRPQM PTDESLSSLA VRRPLTSLIP  60
   61 SRSFQTSAIS RDIDTAAKFI GAGAATVGVA GSGAGIGTVF GSLIIGYARN PSLKQQLFSY 120
  121 AILGFALSEA MGLFCLMVAF LILFAM

Type	Start	End	Confidence
Cytoplasmic	1	78	0.88
Transmembrane Helix	79	105	0.82
Non-Cytoplasmic	106	120	0.75
Transmembrane Helix	121	144	0.93
Cytoplasmic	145	146	0.75