YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPA3K_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFIVAMGMI LMAGICPAVL CFPDGTKEMD IVFHEHQDNG TQDDSLTLAS VNTDFAFSLY  60
   61 KKLALKNPDT NIVFSPLSIS AALALVSLGA KGKTMEEILE GLKFNLTETP EADIHQGFGN 120
  121 LLQSLSQPED QDQINIGNAM FIEKDLQILA EFHEKTRALY QTEAFTADFQ QPTEAKNLIN 180
  181 DYVSNQTQGM IKELISELDE RTLMVLVNYI YFKGKWKISF DPQDTFESEF YLDEKRSVKV 240
  241 PMMKMKLLTT RHFRDEELSC SVLELKYTGN ASALLILPDQ GRMQQVEASL QPETLRKWRK 300
  301 TLFPSQIEEL NLPKFSIASN YRLEEDVLPE MGIKEVFTEQ ADLSGITETK KLSVSQVVHK 360
  361 AVLDVAETGT EAAAATGVIG GIRKAILPAV HFNRPFLFVI YHTSAQSILF MAKVNNPK

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	418	0.99