YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FPRS3_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANSSIPLN GSEVVFYDST TSRVLWILSV IVLSITFVLG VLGNGLVIWV AGFRMAHTVT  60
   61 TICYLNLALG DFSFMVTLPL HIISMVMKGK WLFGWFLCKF VLSIVHINLF VSVFLITLIA 120
  121 MDRCTCVLHP VWVQNHRTVS LARKVIVGAW ILSLLLTLPH FLFLTTVRDA RGEVHCTCNF 180
  181 ESVVANPEEQ LKVSITVSTA TGIISFINCF SLPMSFIAVC YGLMAAKICR KGFLNSSRPL 240
  241 RVLTAVAISF FMCWFPFQLI ILLGNIWNKE TPSSIHILLN PASTLASFNS CLNPILYVFL 300
  301 GQEFREKLIY SLSASLERAL REDSVLSSGK SSNFSSCPAD SEL

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.88
Transmembrane Helix	25	50	0.88
Cytoplasmic	51	61	0.72
Transmembrane Helix	62	83	0.90
Non-Cytoplasmic	84	99	0.73
Transmembrane Helix	100	121	0.86
Cytoplasmic	122	140	0.85
Transmembrane Helix	141	163	0.87
Non-Cytoplasmic	164	202	0.93
Transmembrane Helix	203	225	0.91
Cytoplasmic	226	241	0.88
Transmembrane Helix	242	262	0.94
Non-Cytoplasmic	263	276	0.84
Transmembrane Helix	277	300	0.77
Cytoplasmic	301	343	0.87