YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3123708, gi\|9...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEWTQERRS AKDSDDEEEV VHVDRAHFMA EFFEQVEEIR GCIEKLSEDV GRVGGQHSAI  60
   61 LAAPKPDEKT KQELEDLTAD IKKTANKVRS KLKAIEQGIE QEEGLNRSSA DLRYRTTQHS 120
  121 TVSRNFVEVM TEYNATKSKY RDRCKDRLQR QLEITGRTTT NEELEDMLES GKLAIFTDDI 180
  181 KMDSQMTKQA RNEIETRHNE IIKLETSIRE LHDMFVDMAM LVESQGEMID RIEYNVEHSV 240
  241 DYVERAVSDT KKAVKYQSKA RRKKIMIIIC CVVLGVVLAS SIGGTLGL

Type	Start	End	Confidence
Cytoplasmic	1	264	0.99
Transmembrane Helix	265	286	0.94
Non-Cytoplasmic	287	288	0.85