YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C209A_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSKEMGKR QLRPLDEELL TSSHTRHSIK GFGFQTNSGF SSFTGCLVHS QVPLALQVLF  60
   61 LAVCSVLLVV ILVKVYKIPS SQEENNQMNV YQELTQLKAG VDRLCRSCPW DWTHFQGSCY 120
  121 FFSVAQKSWN DSATACHNVG AQLVVIKSDE EQNFLQQTSK KRGYTWMGLI DMSKESTWYW 180
  181 VDGSPLTLSF MKYWSKGEPN NLGEEDCAEF RDDGWNDTKC TNKKFWICKK LSTSCPSK

Type	Start	End	Confidence
Cytoplasmic	1	31	0.65
Transmembrane Helix	32	48	0.34
Non-Cytoplasmic	49	53	0.43
Transmembrane Helix	54	76	0.82
Cytoplasmic	77	238	0.58