YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C209B_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSTEAKMQ PLSSMDDDEL MVSGSRYSIK SSRLRPNSGI KCLAGCSGHS QVPLVLQLLS  60
   61 FLFLAGLLLI ILFQVSKTPN TERQKEQEKI LQELTQLTDE LTSRIPISQG KNESMQAKIT 120
  121 EQLMQLKTEL LSRIPIFQGQ NESIQEKISE QLMQLKAELL SKISSFPVKD DSKQEKIYQQ 180
  181 LVQMKTELFR LCRLCPWDWT FLLGNCYFFS KSQRNWNDAV TACKEVKAQL VIINSDEEQT 240
  241 FLQQTSKAKG PTWMGLSDLK KEATWLWVDG STLSSRFQKY WNRGEPNNIG EEDCVEFAGD 300
  301 GWNDSKCELK KFWICKKSAT PCTEG

Type	Start	End	Confidence
Cytoplasmic	1	53	0.80
Transmembrane Helix	54	75	0.89
Non-Cytoplasmic	76	325	0.84