YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C209D_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSMESKTQ QVVIPEDEEC LMSGTRYSDI SSRLQTKFGI KSLAEYTKQS RNPLVLQLLS  60
   61 FLFLAGLLLI ILILVSKVPS SEVQNKIYQE LMQLKAEVHD GLCQPCARDW TFFNGSCYFF 120
  121 SKSQRNWHNS TTACQELGAQ LVIIETDEEQ TFLQQTSKAR GPTWMGLSDM HNEATWHWVD 180
  181 GSPLSPSFTR YWNRGEPNNV GDEDCAEFSG DGWNDLSCDK LLFWICKKVS TSSCTTK

Type	Start	End	Confidence
Cytoplasmic	1	53	0.95
Transmembrane Helix	54	75	0.93
Non-Cytoplasmic	76	237	0.96