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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPI:IPI00157501....
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCQISCRSR RGGGGGGGGG FRGFSSGSAV VSGGSRRSNT SFSCISRHGG GRGGSGGGGF  60
   61 GSQSLVGLGG YKSISSSVAG NSGGYGGSSF GGSSGFGGGR GFGGGQGFGG SGGFGGGSGF 120
  121 GGGQGFGGGS RFGGGSGFGG GGFGGGSFGG GRFGGGPGGF GGPGGFPGGG IHEVSVNQSL 180
  181 LQPLDVKVDP EIQNVKSQER EQIKTLNNKF ASFIDKVRFL EQQNQVLRTK WELLQQLDVG 240
  241 SRTTNLDPIF QAYIGMLKKQ VDRLSAERTS QESELNNMQD LVEDFKKKYE DEINKRTSAE 300
  301 NDFVTIKKDV DSCYMDKTEL QARLDILAQE VNFLRTLYDA ELSQLQQDVT DTNVILSMDN 360
  361 NRNLDLDSII AEVQNQYEMI AHKSKAESEE LYHSKAIPLF PHQYEELQVT AVKHGDSLKE 420
  421 IKMEISELNR TIQRLQGEIS HVKKQCKGVQ DSIADAEQRG EHAIKDARGK LTDLEEALQQ 480
  481 CREDLARLLR DYQELMNTKL SLDVEIATYR KLLEGEECRM SGDFSDNVSV SITSSTISSS 540
  541 VASKTGFGSG GQSSGGRGSY GGRGGGGGGG STYGSGGRSS GSRGSGSGSG GGGYSSGGGS 600
  601 RGGSGGGYGS GGGSRGGSGG GYGSGGGSGS GGGYSSGGGS RGGSGGGGVS SGGGSRGGSS 660
  661 SGGGSRGGSS SGGGGYSSGG GSRGGSSSGG AGSSSEKGGS GSGEGCGSGV TFSFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle