YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ABHD3_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLAMDLRV LSRELALYLE HQVRVGFFGS GVGLSLILGF SVAYACYYLS SIAKKPQLVI  60
   61 GGESFSRFLQ DHCPVVTETY YPTVWCWESR GQTLLRPFIT SKPPVQYRNE LIKTADGGQI 120
  121 SLDWFDNNNS AYYVDASTRP TILLLPGLTG TSKESYILHM IHLSEELGYR CVVFNNRGVA 180
  181 GESLLTPRTY CCANTEDLEA VVHHVHSLYP GAPFLAAGVS MGGMLLLNYL GKIGSKTPLM 240
  241 AAATFSVGWN TFACSESLER PLNWLLFNYY LTTCLQSSVK KHRHMFVEQI DMDQVMKAKS 300
  301 IREFDKRFTA VMFGYRTLDD YYTDASPNRR LKSVGIPVLC LNATDDVFSP SHAIPIETAK 360
  361 QNPNVALVLT AYGGHIGFLE GIWPRQCTYM DRVFKQFVQA MVEHGHELSN M

Type	Start	End	Confidence
Cytoplasmic	1	20	0.73
Transmembrane Helix	21	48	0.78
Non-Cytoplasmic	49	411	0.61