YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPYA_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRMLAKASV TLGSRAAGWV RTMGSYQLLV PPPEALSKPL SVPTRLLLGP GPSNLAPRVL  60
   61 AAGSLRMIGH MQKEMLQIME EIKQGIQYVF QTRNPLTLVV SGSGHCAMET ALFNLLEPGD 120
  121 SFLTGTNGIW GMRAAEIADR IGARVHQMIK KPGEHYTLQE VEEGLAQHKP VLLFLVHGES 180
  181 STGVVQPLDG FGELCHRYQC LLLVDSVASL GGVPIYMDQQ GIDIMYSSSQ KVLNAPPGIS 240
  241 LISFNDKAKY KVYSRKTKPV SFYTDITYLA KLWGCEGETR VIHHTTPVTS LYCLRESLAL 300
  301 IAERGLENCW RRHREATAHL HKHLQEMGLK FFVKDPEIRL PTITTVTAAG YNWRDIVSYV 360
  361 LDHFSIEISG GLGPTEERVL RIGLLGYNAT TENVDRVAEA LREALQHCPK NKL

Type	Start	End	Confidence
Signal Peptide	1	16	0.75
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	413	0.99